Introduction The HiC interaction matrix is the interaction score between two positions on the genome. The HiC interaction graph can
Introduction The display of bedgraph can use the plotBedgraph function of Sushi package Code explanation Input bedGraph formatdata frame head(Sushi_DNaseI.bedgraph)
Introduction Sushi package can draw a variety of common genome formats, including bed, bedpe, bedgraph, Hic matrix, Manhattan map, gene
Introduction When ggplot is making box plots or dot plots, it can actually check and add p-values, just use the
Introduction Sometimes we need to use a loop to draw multiple ggplot graphs, we fixed x, and y needs to
Introduction Sometimes we need to arrange multiple images on a picture. For the functions of the R language basic package,
Why normalization When we draw heat maps, linear regression, neural networks, etc., we often need to normalize the data first.